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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905306.1_cds_XP_016455509.1_49436
CDS Infomation

[gene=LOC107779573] [db_xref=GeneID:107779573] [protein=protein NSP-INTERACTING KINASE 1-like isoform X2] [protein_id=XP_016455509.1] [location=join(8556..8661,8772..8904,9018..9089,9171..9314,9411..9482,9596..9655,9763..9851,9978..10124,10217..10558,10641..11020,11319..11642)] [gbkey=CDS]
Sequence

ATGGAAAGTAGAAGTGAGTTAAATGCTACATTCTTGTTTGTGACATTCTTGGCCCTTTGG
AACACTGCAACAGGATTGCTTTCTCCTAAAGGTGTCAACTTTGAAGTGCAAGCTTTAATG
GCAATAAAAGCTGCTTTAAAAGATCCTCATGGAGTTCTTGATAATTGGGATGGCACCTCA
GTTGATCCGTGTAGTTGGGCTATGGTTACTTGCTCTGCTGAGAGTTTTGTTATTGGCCTA
GGGTCTCCCAGCCAAAATCTATCTGGTAATCTTTCTCCAAGCATTGGCAATTTAACAAAT
CTTCAGATTATATTAATGCAGAATAACAATATAACAGGACCAATACCAAAAGAGATTGGA
AGGCTCTCAAAGCTTCAGACTCTTGATCTTTCAGATAATTTCTTTATTGGTGATATTCCT
CCTTCTTTGGGACACTTGAATAGCCTCAAGTACATGAGGCTCAACAATAACAGTTTATCT
GGAGAAATTCCAGTCTCATTGACTAACCTGTCACAGCTCACTCTTGTGGACTTATCCTAT
AATAACTTGAGCGGACCAGTGCCTAGGTTCCCTTCTAAGAAATTCGACATCATTGGAAAT
CCATTGATCTGTCCGACAGGATCTGAGCCAGACTGCTATGGAACGCAGCTGCTGCCTATG
TCAATGACATTGAACACTCTGCCTTCTGGGAAGCAAAAAAGTCATAAAATTGCCCTTGTG
TTTGGCTCAAGCCTTGGTTGCGTCTCTTTGCTCGTTCTTGGAATTGGACTGTTTCTATGG
TCAAGGCATAGACATAGTCAACAGGCCTTTTTTGATGTCAAAGATCGGCACCATGAAGAG
GTTTCCCTTGGAAATTTGAGAAGATTTCAATTCAAGGATCTCCAGATTGCAACCAACAAC
TTCAGCAGTAAAAACATTTTGGGAAAAGGTGGTTTTGGGAAAGTTTATAAAGGTCATCTC
CCAGATGGGACTCCTGTCGCTGTAAAGAGGCTAAATGATGGCAATGCAATTGGCGGTGAG
AAACAATTTCAGACAGAAGTTGAAATGATAAGCTTAGCAGTGCATCGTAACCTCCTCAGG
CTCTATGGATTTTGCATGACACCAAACGAGAAGCTTTTGGTTTACCCCTATATGTCTAAT
GGTAGTGTAGCTTTTCGTCTCAGAGCAAAACCGGTGTTGGACTGGGGAACAAGGAAGCGA
ATTGCTCTAGGAGCTGCTCGAGGACTGTTGTATCTTCATGAACAATGTGATCCAAAGATA
ATTCATAGGGATGTTAAGGCAGCAAATATATTGCTCGATGACTATTGTGAGGCGGTTGTG
GGAGACTTTGGGCTGGCAAAGCTTTTGGATCACCAGGATACACATGTCACAACTGCTGTT
CGTGGAACGGTGGGGCATATAGCGCCAGAATACCTTTCAACAGGCCAATCATCTGAGAAA
ACTGATGTGTTTGGATTTGGAATCCTTCTTCTTGAACTGATCACAGGAATGAGAGCTATA
GAATTTGGAAAAGCAGCTAACCAGAAGGGAGCAATGCTTGATTGGGTTAAGAAAATTCAC
CAAGAAAAGAAGCTTGATATCCTGGTTGATAAAGATTTGAAAAGCAACTACGATCGAATT
GAGCTAGAGGAAATGGTTCAAGTTGCTCTGCTCTGCACTCAATATCTTCCAGGCCACAGA
CCAAAAATGTCTGAAATCGTTCGAATGCTTGAAGGTGATGGACTTGCAGAGAGGTGGGAA
GCATCCCAGAAATTTGACGGTAGTAACAAGTACAAAACGAAAGAGTTGTCTTCGTCCGAG
AGATTTTCAGATCTCACCGATGATTCTTTGTTGCTTGTACAAGCCATGGAGCTATCTGGT
CCTAGGTGA

Peptide Sequence

PEP ID

XP_016455509.1
PEP Infomation

PREDICTED: protein NSP-INTERACTING KINASE 1-like isoform X2 [Nicotiana tabacum]
Sequence

MESRSELNATFLFVTFLALWNTATGLLSPKGVNFEVQALMAIKAALKDPHGVLDNWDGTS
VDPCSWAMVTCSAESFVIGLGSPSQNLSGNLSPSIGNLTNLQIILMQNNNITGPIPKEIG
RLSKLQTLDLSDNFFIGDIPPSLGHLNSLKYMRLNNNSLSGEIPVSLTNLSQLTLVDLSY
NNLSGPVPRFPSKKFDIIGNPLICPTGSEPDCYGTQLLPMSMTLNTLPSGKQKSHKIALV
FGSSLGCVSLLVLGIGLFLWSRHRHSQQAFFDVKDRHHEEVSLGNLRRFQFKDLQIATNN
FSSKNILGKGGFGKVYKGHLPDGTPVAVKRLNDGNAIGGEKQFQTEVEMISLAVHRNLLR
LYGFCMTPNEKLLVYPYMSNGSVAFRLRAKPVLDWGTRKRIALGAARGLLYLHEQCDPKI
IHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDTHVTTAVRGTVGHIAPEYLSTGQSSEK
TDVFGFGILLLELITGMRAIEFGKAANQKGAMLDWVKKIHQEKKLDILVDKDLKSNYDRI
ELEEMVQVALLCTQYLPGHRPKMSEIVRMLEGDGLAERWEASQKFDGSNKYKTKELSSSE
RFSDLTDDSLLLVQAMELSGPR

Transcript Sequence

Gene sequence data has not been registered.